Molecular model of shikimate kinase from Mycobacterium tuberculosis

Tuberculosis (TB) resurged in the late 1980s and now kills approximately 3 million people a year. The reemergence of tuberculosis as a public health threat has created a need to develop new anti-mycobacterial agents. The shikimate pathway is an attractive target for herbicides and anti-microbial agents development because it is essential in algae, higher plants, bacteria, and fungi, but absent from mammals. Homologs to enzymes in the shikimate pathway have been identified in the genome sequence of Mycobacterium tuberculosis. Among them, the shikimate kinase I encoding gene (aroK) was proposed to be present by sequence homology. Accordingly, to pave the way for structural and functional efforts towards anti-mycobacterial agents development, here we describe the molecular modeling of M. tuberculosis shikimate kinase that should provide a structural framework on which the design of specific inhibitors may be based. © 2002 Elsevier Science (USA). All rights reserved.

Isolation and characterization of microsatellite loci from the forage species Arachis pintoi (Genus Arachis)

Arachis pintoi is an alternative to forage production in the tropics. Its germplasm comprises more than 150 accessions, that could be used to improve it. Our objective was the isolation and characterization of microsatellite loci in A. pintoi to be used to molecular evaluation of this germplasm and of A. repens (section Caulorrhizae). Seven loci were analyzed using five accessions of A. repens and 20 accessions of A. pintoi. The high variation found makes clear the high potential of this marker in genetic studies in these species. The developed markers showed total transferability to A. repens.

Genetic variation within and among species of five sections of the genus Arachis L. (Leguminosae) using RAPDs

Some Arachis species are widely used as commercial plants, e.g. the groundnut A. hypogaea, an important source of good quality protein and oil, and A. pintoi and A. glabrata, that are utilized as forage species. Germplasm of most Arachis species is available in germplasm banks. However, little it is known about the genetic attributes of this germplasm, and mainly about its genetic variability, which is very important for its maintenance. In the present study RAPDs were used to assay the genetic variation within and among 48 accessions of five sections of the genus Arachis and to establish the genetic relationships among these accessions. Ten of 34 primers tested were selected for DNA amplification reactions since they yielded the largest numbers of polymorphic loci. A dendrogram was constructed based on data from the 10 primers selected. Eighty RAPD polymorphic bands were analyzed among the accessions studied. The relationships among species based on RAPDs were similar to those previously reported based on morphological, cytological and crossability data; demonstrating that RAPDs can be used to determine the genetic relationships among species of the different sections of the genus Arachis. In general, wide variation was found among accessions and low variation was found within the accessions that had two or more plants analyzed. However, higher polymorphism was found in the section Trierectoides and in one accession of A. major, indicating that generalizations should be avoided and each species should be analyzed in order to establish collection and maintenance strategies.

Comportamento de cultivares de cafeeiro em diferentes densidades de plantio

This experiment was developed at Adamantina, west region of the State of São Paulo, Brazil, during May 1995 to June of 2000. The plant growth and productivity of two coffee cultivars Catuaí Amarelo IAC 47 and Obatã IAC 1669-20, were evaluated considering to plant densities of 2.500, 5.000, 7.519 and 10.000 plants ha-1. The density of 2500 also was studied with two plants in the same hole, spaced of 2,0 m in the plant line. The experimental design was the randomized completely blocks with three replications, using the split-plot system. The plots were the densities and the split-plots were the cultivars. Results showed that, with increasing of the planting density, the plant height also increased, while the stem and plant basis diameters were reduced, however the planting density did not affect the height of the first branch. The increase of the planting density also increased the field productivity and reduced the production of individual plant. The cultivation of two plants at the same hole reduced the stem diameter and the plant yield. The cultivar Catuaí Amarelo IAC 47 showed the higher plant height and the higher plant basis diameter while cv. Obatã IAC 1669-20 showed the higher stem diameter. The field productivity and individual plant productivity were not different between those cultivars in the period studied (1997-2000).

Fontes e parcelamento do nitrogênio em cobertura, na cultura do milho sob plantio direto

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)